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In vivo and In vitro Studies of Class I Heat Shock Protein Regulation in Bacillus subtilis
Jaclyn Winter, Scott Leddon, Jason Randall, Jason Plyler, Steve Persaud, and Matthew Fountain
      Class I heat shock proteins in prokaryotic organisms are negatively regulated by the protein HrcA. HrcA binds to a DNA inverted repeat, CIRCE, in the promoter region of the GroE operon gene, which inhibits the transcription of the chaperone proteins. The GroE chaperonin system modulates the activity of HrcA. Under heat shock conditions, the chaperonin system is overwhelmed with denatured proteins and is unable to maintain HrcA in its active form. HrcA dissociates from CIRCE allowing for transcription of the GroE operon. We characterized the CIRCE inverted repeat sequence to determine whether or not it adopts a cruciform structure using nuclease S1 digestion, fluorescence resonance energy transfer, and optical melting studies. These studies show the CIRCE sequence adopts a linear rather than a cruciform structure as previously hypothesized. The HrcA gene from B. subtilis was isolated using PCR, and incorporated into a P-Lex expression vector. A reporter plasmid containing the GroE promoter, CIRCE sequence and a b-galactosidase reporter gene was also constructed. The plasmids were transformed into E.coli, which lacks the HrcA/CIRCE regulatory system. The regulation of the b-galactosidase gene was studied under different heat shock conditions. This system allows us to study the thermostatic control of the HrcA:CIRCE complex in vivo and permits us to expand our studies to include CIRCE sequences and HrcA proteins from other organisms.